Raw file	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Variable modifications first search	Use variable modifications first search	Multiplicity	Max. missed cleavages	Max. labeled AAs	Labels0	Labels1	Labels2	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS/MS Submitted	MS/MS Submitted (SIL)	MS/MS Submitted (ISO)	MS/MS Submitted (PEAK)	MS/MS Identified	MS/MS Identified (SIL)	MS/MS Identified (ISO)	MS/MS Identified (PEAK)	MS/MS Identified [%]	MS/MS Identified (SIL) [%]	MS/MS Identified (ISO) [%]	MS/MS Identified (PEAK) [%]	Peptide Sequences Identified	Peaks	Peaks Sequenced	Peaks Sequenced [%]	Peaks Repeatedly Sequenced	Peaks Repeatedly Sequenced [%]	Isotope Patterns	Isotope Patterns Sequenced	Isotope Patterns Sequenced (z>1)	Isotope Patterns Sequenced [%]	Isotope Patterns Sequenced (z>1) [%]	Isotope Patterns Repeatedly Sequenced	Isotope Patterns Repeatedly Sequenced [%]	Multiplets	Multiplets z=1	Multiplets z=2	Multiplets z=3	Multiplets z=4	Multiplets z=5	Multiplets z=6	Multiplets Sequenced	Multiplets Sequenced [%]	Multiplets Repeatedly Sequenced	Multiplets Repeatedly Sequenced [%]	Multiplets Identified	Multiplets Identified [%]	Recalibrated	Av. Absolute Mass Deviation [ppm]	Mass Standard Deviation [ppm]	Av. Absolute Mass Deviation [mDa]	Mass Standard Deviation [mDa]	Label free norm param
SET1- 1A- LINEAR-1	Trypsin	Specific			False	Oxidation (M);BONCAT;Deamidation (NQ);Leucine(label);Met->aha(tag);Met->aha(tagMCL)		False	3	1	3	arg(norm);Lysine(norm)	Arg6;Lys6	Arg10;Lys8	Standard		64010	149739	206658	1017	88335	117306	18286	348	15288	2650	8.85	34.22	17.31	2.26	1296	3197494	45681	1.43	23791	52.08	261878	18365	15657	7.01	9.81	12620	68.72	533	406	77	40	10	0	0	92	17.26	81	88.04	28	30.43	+	2.3557	3.0706	42834	99970	
Total																	64010	149739	206658	1017	88335	117306	18286	348	15288	2650	8.85	34.22	17.31	2.26	1296	3197494					261878	18365	15657	7.01	9.81	12620	68.72	533	406	77	40	10	0	0	92	17.26	81	88.04	28	30.43		2.3557	3.0706	42834	99970	
